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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816181.1_cds_XP_016498658.1_12662
CDS Infomation

[gene=LOC107817366] [db_xref=GeneID:107817366] [protein=2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase-like] [protein_id=XP_016498658.1] [location=complement(join(34558..34723,34920..34987,35093..35182,36484..37185))] [gbkey=CDS]
Sequence

ATGGTGAACTTGGTAGAAGCTCAGAAACCTTTGTTGCATGGCCTAATGAAAATGGCTGGA
ATCAAACCTCATAGTATAGAGATAGAACCAGGCACTATTATGAACTTTTGGGTTCCTTCT
GAAACCATAAAAAACACAAAGAAAAACAAGAAAATCACCACAACTACTCCTTTTTCCAAT
AACCAGTGCGCCACTTCCCCTGAAACCACCACAAAACCTGACCCCACCAAACCCGTAGTC
GTTCTAGTCCATGGCTTCGCTGGCGAAGGAATTGTCACGTGGCAATTCCAAATTGGCGCA
TTGACTAAGAAATACTCTGTTTACGTACCGGACCTACTTTTCTTCGGTGGCTCAGTAACC
GATTGCGACGATAGATCACCTGGTTTTCAAGCTGAGTGTTTGGCTAAAGGGCTAAGGAAA
TTGGGTGTGGAAAAGTGCATAGTGGTTGGGTTTAGTTATGGTGGAATGGTGGCGTTTAAG
ATGGCTGAAATGTATCCTGATTTGGTTGAGGCTTTAGTGATTTCTGGTTCCATATTGGCT
ATGACTGATTCTATTAGCACTTCGACGCTAAATGGTTTGGGATTCTCTTCTTCTTCTGAG
CTGCTGTTGCCTACTTCTGTTAAGGGTCTAAAGGCACTTCTCAAAGTAGCTGCTTATAAG
AAACTTTGGTTCCCTGATCGCCTTCACAGGGACTTTCTTGAGGTAATGTTCACCAACAGA
AAAGAAAGAGGAGAACTGCTAGAAGGCTTGGTAGTGAGCAACAAAGATACCAATATTCCA
AATTTTCCACAGAGAATACATCTCCTCTGGGGTGAGAATGATCAAATTTTCAATTTGGAG
CTTGCTCAGAACATGAAAGATCAACTAGGTGACAAGACTACATTTCATGGCATAGAGAAG
GCTGGGCATCTGGTTCACCTAGAGCGACCTTGCGTCTACAACAGGTGTCTCAAGCACTTC
CTTACTTCCCTGCATGCAGAAAAAGCCCAAATACTGAAGGACACTACCACAAATTCCACT
ATCTAA

Peptide Sequence

PEP ID

XP_016498658.1
PEP Infomation

PREDICTED: 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase-like [Nicotiana tabacum]
Sequence

MVNLVEAQKPLLHGLMKMAGIKPHSIEIEPGTIMNFWVPSETIKNTKKNKKITTTTPFSN
NQCATSPETTTKPDPTKPVVVLVHGFAGEGIVTWQFQIGALTKKYSVYVPDLLFFGGSVT
DCDDRSPGFQAECLAKGLRKLGVEKCIVVGFSYGGMVAFKMAEMYPDLVEALVISGSILA
MTDSISTSTLNGLGFSSSSELLLPTSVKGLKALLKVAAYKKLWFPDRLHRDFLEVMFTNR
KERGELLEGLVVSNKDTNIPNFPQRIHLLWGENDQIFNLELAQNMKDQLGDKTTFHGIEK
AGHLVHLERPCVYNRCLKHFLTSLHAEKAQILKDTTTNSTI

Transcript Sequence

Gene sequence data has not been registered.